C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adaptor-related protein complex AP-1, sigma 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000160706 Ap1s3-003 ENSMUSG00000054702 10090 - 1:79609186-79671968 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryENSMUST00000160706
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary
ENSMUST00000160706 27.131±1.66 1.008±0.40 12.426±4.64 32.528±5.77 0.745±0.12 13.322±2.61 1.012±0.00 12.875±2.77 6.723±2.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004AM CIL_0004AM_0004 CGP 1:79434669-79671972
CIL_0006XJ CIL_0006XJ_0002 CGP 1:79606876-79776143

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008565 IEA protein transporter activity
GO:0015031 IEA protein transport
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000334271 AP1S3-003 nonsense_mediated_decay Homo_sapiens 0 429
ENST00000396653 AP1S3-005 protein_coding Homo_sapiens 0 390
ENST00000396654 AP1S3-007 protein_coding Homo_sapiens 0 233
ENST00000409375 AP1S3-006 protein_coding Homo_sapiens 0.00000000003 73
ENST00000415298 AP1S3-002 nonsense_mediated_decay Homo_sapiens 0 235
ENST00000443700 AP1S3-001 protein_coding Homo_sapiens 0 204
ENST00000444408 AP1S3-004 protein_coding Homo_sapiens 2e-27 126
ENST00000446015 AP1S3-008 protein_coding Homo_sapiens 0 202

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