C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BRCA1/BRCA2-containing complex, subunit 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000151938 Brcc3-003 ENSMUSG00000031201 10090 + X:75416700-75450732 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonOvaryPlacentaTestisENSMUST00000151938
Transcript ID Adrenal Breast Colon Ovary Placenta Testis
ENSMUST00000151938 0.552±0.19 0.434±0.04 0.568±0.19 0.933±0.27 0.343±0.00 0.095±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003LJ CIL_0003LJ_0002 CGP X:75416628-75534942

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000330045 BRCC3-002 protein_coding Homo_sapiens 0 1031
ENST00000340647 BRCC3-006 protein_coding Homo_sapiens 0 1035
ENST00000369459 BRCC3-004 protein_coding Homo_sapiens 0 580
ENST00000369462 BRCC3-001 protein_coding Homo_sapiens 0 584
ENST00000399026 BRCC3-003 protein_coding Homo_sapiens 0 307
ENST00000399042 BRCC3-201 protein_coding Homo_sapiens 0 573
ENST00000411985 BRCC3-007 protein_coding Homo_sapiens 0 523
ENST00000453705 BRCC3-005 nonsense_mediated_decay Homo_sapiens 0 1035
ENST00000508559 RP11-844P9.3-001 processed_pseudogene Homo_sapiens 0 534
ENST00000620502 BRCC3-202 protein_coding Homo_sapiens 0 1003

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