C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 14448
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000116383 Gm14448-001 ENSMUSG00000080186 10090 - X:5885743-5885952 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverPlacentaENSMUST00000116383
Transcript ID Bladder Brain Liver Placenta
ENSMUST00000116383 0.205±0.00 0.622±0.10 4.869±3.88 1.382±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000255320 HMGB1P5-001 transcribed_processed_pseudogene Homo_sapiens 0 261
ENST00000326004 HMGB1-003 protein_coding Homo_sapiens 0 261
ENST00000339872 HMGB1-001 protein_coding Homo_sapiens 0 261
ENST00000341423 HMGB1-004 protein_coding Homo_sapiens 0 261
ENST00000366304 HMGB1P39-001 processed_pseudogene Homo_sapiens 2e-39 167
ENST00000395823 HMGB1P10-001 processed_pseudogene Homo_sapiens 0 239
ENST00000399489 HMGB1-009 protein_coding Homo_sapiens 0 261
ENST00000399494 HMGB1-011 protein_coding Homo_sapiens 0 261
ENST00000402555 HMGB1P20-001 processed_pseudogene Homo_sapiens 0 209
ENST00000405805 HMGB1-012 protein_coding Homo_sapiens 0 261
ENST00000406019 HMGB1P13-001 processed_pseudogene Homo_sapiens 0 209
ENST00000413899 HMGB1P11-001 processed_pseudogene Homo_sapiens 0 222
ENST00000437242 HMGB1P31-001 processed_pseudogene Homo_sapiens 0.000000000002 77
ENST00000439613 HMGB1P37-001 processed_pseudogene Homo_sapiens 8e-37 158
ENST00000447155 HMGB1P16-001 processed_pseudogene Homo_sapiens 0 193
ENST00000451497 HMGB1P5-002 processed_transcript Homo_sapiens 5e-16 90
ENST00000452520 HMGB1P26-001 processed_pseudogene Homo_sapiens 1e-39 167
ENST00000459868 FMO1-004 processed_transcript Homo_sapiens 0 200
ENST00000487709 HMGB1P36-001 processed_pseudogene Homo_sapiens 1e-24 117
ENST00000522557 HMGB1P1-001 processed_pseudogene Homo_sapiens 0 244
ENST00000558211 HMGB1P8-001 processed_pseudogene Homo_sapiens 4.00001e-41 172
ENST00000569046 RP11-673C5.1-001 processed_pseudogene Homo_sapiens 0 235
ENST00000611897 RP11-19G24.3-002 processed_transcript Homo_sapiens 4.99997e-41 171
ENST00000615653 RP11-19G24.3-001 transcribed_processed_pseudogene Homo_sapiens 0 195

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