C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 6 (neurotransmitter transporter, creatine), member 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114467 Slc6a8-201 ENSMUSG00000019558 10090 + X:73673242-73681640 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000114467
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000114467 2.651±0.66 8.995±1.21 5.881±2.17 5.056±1.82 55.730±14.38 15.572±2.81 27.854±4.06 0.526±0.43 5.706±0.48 8.124±2.27 9.205±3.53 0.640±0.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001UY CIL_0001UY_0002 CGP X:73655994-73682502
CIL_0001UX CIL_0001UX_0002 CGP X:73673150-73716175

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005328 IEA neurotransmitter:sodium symporter activity
GO:0005887 IEA integral component of plasma membrane
GO:0006814 IEA sodium ion transport
GO:0006836 IEA neurotransmitter transport
GO:1902598 IEA creatine transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000129303 SLC6A3-201 protein_coding Danio_rerio 0.000000002 69
ENST00000253122 SLC6A8-002 protein_coding Homo_sapiens 0 2952
ENST00000254488 SLC6A11-001 protein_coding Homo_sapiens 0.000000000000002 90
ENST00000330048 SLC6A10P-002 processed_transcript Homo_sapiens 0 671
ENST00000413787 SLC6A8-008 protein_coding Homo_sapiens 0 272
ENST00000429147 SLC6A8-006 protein_coding Homo_sapiens 0 329
ENST00000430077 SLC6A8-005 protein_coding Homo_sapiens 0 2442
ENST00000431994 SLC6A10P-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 2595
ENST00000442457 SLC6A8-009 protein_coding Homo_sapiens 0 590
ENST00000454147 SLC6A11-002 protein_coding Homo_sapiens 0.000000000000001 90
ENST00000457723 SLC6A8-001 protein_coding Homo_sapiens 0 337
ENST00000466243 SLC6A8-010 processed_transcript Homo_sapiens 0 532
ENST00000467402 SLC6A8-007 processed_transcript Homo_sapiens 0 233
ENST00000476466 SLC6A8-004 processed_transcript Homo_sapiens 0 377
ENST00000485324 SLC6A8-003 processed_transcript Homo_sapiens 0 773
ENST00000561837 SLC6A10P-003 processed_transcript Homo_sapiens 0 226
ENST00000568600 RP11-598D12.4-001 unprocessed_pseudogene Homo_sapiens 0 804
ENST00000611339 AC136616.1-202 protein_coding Homo_sapiens 0 2453
ENST00000613216 AC136616.1-201 protein_coding Homo_sapiens 0 2760

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