C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin N-terminal domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000103107 Cntd1-001 ENSMUSG00000078653 10090 + 11:101279096-101288701 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000103107
Transcript ID Testis
ENSMUST00000103107 16.528±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005SA CIL_0005SA_0002 CGP 11:101260567-101279114
CIL_0005SB CIL_0005SB_0002 CGP 11:101277968-101296317
CIL_0005S8 CIL_0005S8_0002 CGP 11:101279012-101302286

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000315066 CNTD1-003 processed_transcript Homo_sapiens 0 667
ENST00000361523 BECN1-002 protein_coding Homo_sapiens 5e-39 167
ENST00000438274 BECN1-003 protein_coding Homo_sapiens 3e-39 167
ENST00000585355 CNTD1-006 protein_coding Homo_sapiens 0 573
ENST00000586652 CNTD1-007 protein_coding Homo_sapiens 0 335
ENST00000588276 BECN1-021 protein_coding Homo_sapiens 2e-39 167
ENST00000588408 CNTD1-001 protein_coding Homo_sapiens 0 1162
ENST00000588527 CNTD1-002 protein_coding Homo_sapiens 0 929
ENST00000590099 BECN1-001 protein_coding Homo_sapiens 5e-39 167
ENST00000590764 BECN1-018 protein_coding Homo_sapiens 2e-39 167
ENST00000591559 CNTD1-005 processed_transcript Homo_sapiens 0 267
ENST00000592166 CNTD1-004 nonsense_mediated_decay Homo_sapiens 0 534
ENST00000617806 BECN1-005 retained_intron Homo_sapiens 1e-38 167

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