C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SLIT and NTRK-like family, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000059407 Slitrk3-201 ENSMUSG00000048304 10090 - 3:73048126-73056943 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000059407
Transcript ID Adipose Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000059407 1.140±1.13 0.040±0.02 5.928±2.68 0.027±0.02 0.089±0.05 0.008±0.00 0.003±0.00 0.029±0.00 0.027±0.01 0.634±0.25 0.173±0.00 0.013±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001ZF CIL_0001ZF_0002 CGP 3:72888557-73056943
CIL_0001ZC CIL_0001ZC_0002 CGP 3:73048126-73708415

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0007409 IDA axonogenesis
GO:0016021 ISS integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000241274 SLITRK3-001 protein_coding Homo_sapiens 0 4410
ENST00000475390 SLITRK3-002 protein_coding Homo_sapiens 0 4074
ENST00000497724 SLITRK3-003 protein_coding Homo_sapiens 0 726

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