C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polymerase (DNA directed), epsilon
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000007296 Pole-001 ENSMUSG00000007080 10090 + 5:110286306-110337474 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000007296
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000007296 1.525±1.05 0.337±0.14 0.316±0.04 2.790±1.86 0.678±0.31 0.886±0.31 0.202±0.02 0.182±0.04 2.709±2.92 0.368±0.07 0.317±0.12 2.662±0.99 3.210±2.46 4.441±1.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000329 CIL_000329_0002 CGP 5:110286306-110343035

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000082 IEA G1/S transition of mitotic cell cycle
GO:0000166 IEA nucleotide binding
GO:0000731 IEA DNA synthesis involved in DNA repair
GO:0001701 IEA in utero embryonic development
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0003887 IEA DNA-directed DNA polymerase activity
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0006287 IEA base-excision repair, gap-filling
GO:0006297 IEA nucleotide-excision repair, DNA gap filling
GO:0008270 IEA zinc ion binding
GO:0008622 ISS epsilon DNA polymerase complex
GO:0051539 IEA 4 iron, 4 sulfur cluster binding
GO:0071897 IEA DNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000081411 pole-001 protein_coding Danio_rerio 0 2128
ENST00000320574 POLE-001 protein_coding Homo_sapiens 0 7380
ENST00000434528 POLE-027 processed_transcript Homo_sapiens 0 538
ENST00000534922 POLE-024 retained_intron Homo_sapiens 0 630
ENST00000535270 POLE-004 protein_coding Homo_sapiens 0 7107
ENST00000535934 POLE-010 retained_intron Homo_sapiens 0 708
ENST00000536445 POLE-014 retained_intron Homo_sapiens 0 880
ENST00000537064 POLE-002 nonsense_mediated_decay Homo_sapiens 0 3688
ENST00000539215 POLE-012 processed_transcript Homo_sapiens 0 455
ENST00000541213 POLE-020 retained_intron Homo_sapiens 0 593
ENST00000544692 POLE-003 retained_intron Homo_sapiens 0 870
ENST00000544870 POLE-025 nonsense_mediated_decay Homo_sapiens 0 571
ENST00000545015 POLE-013 retained_intron Homo_sapiens 0 335

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