C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: AT rich interactive domain 1Ab (SWI-like)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000140747 arid1ab-001 ENSDARG00000060073 7955 + 19:30798757-30881679 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000140747
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000140747 4.968±3.58 2.029±1.34 1.473±1.74 1.239±0.00 1.137±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000008024 Arid1a-002 protein_coding Mus_musculus 0 392
ENSMUST00000105897 Arid1a-201 protein_coding Mus_musculus 0 392
ENSMUST00000145664 Arid1a-001 protein_coding Mus_musculus 0 392

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