C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: intermediate filament family orphan 1b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000123011 iffo1b-201 ENSDARG00000062108 7955 - 16:19163804-19224185 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000123011
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000123011 1.080±0.00 0.704±0.30 1.891±0.55 0.026±0.00 0.124±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005882 IEA intermediate filament

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000051171 Iffo1-201 protein_coding Mus_musculus 0 211
ENSMUST00000088276 Iffo1-202 protein_coding Mus_musculus 0 211
ENSMUST00000117675 Iffo1-002 protein_coding Mus_musculus 0 211
ENSMUST00000119527 Iffo1-001 protein_coding Mus_musculus 0 211
ENSMUST00000135559 Iffo1-003 retained_intron Mus_musculus 0 211
ENSMUST00000139071 Iffo1-008 retained_intron Mus_musculus 0 196
ENSMUST00000141230 Iffo1-004 retained_intron Mus_musculus 5e-40 171
ENSMUST00000144364 Iffo1-005 nonsense_mediated_decay Mus_musculus 0 207
ENSMUST00000148835 Iffo1-007 protein_coding Mus_musculus 0 207
ENSMUST00000150474 Iffo1-010 retained_intron Mus_musculus 9.99995e-41 171

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