C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chondroitin sulfate synthase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000104536 chsy1-201 ENSDARG00000079027 7955 + 7:10106856-10292018 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000104536
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000104536 3.817±0.32 3.316±2.27 1.823±0.72 0.532±0.00 1.667±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007CN CIL_0007CN_0001 CGP 7:10089247-10292018

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003007 IMP heart morphogenesis
GO:0008593 IMP regulation of Notch signaling pathway
GO:0016020 IEA membrane
GO:0016757 IEA transferase activity, transferring glycosyl groups
GO:0016758 IEA transferase activity, transferring hexosyl groups
GO:0032580 IEA Golgi cisterna membrane
GO:0033339 IMP pectoral fin development
GO:0050650 IMP chondroitin sulfate proteoglycan biosynthetic process
GO:0060041 IMP retina development in camera-type eye
GO:0060042 IMP retina morphogenesis in camera-type eye
GO:0060536 IMP cartilage morphogenesis
GO:0060876 IMP semicircular canal formation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000254190 CHSY1-001 protein_coding Homo_sapiens 0 1064

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