C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chondroitin sulfate synthase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000079027 chsy1 7955 + 7:10106856-10292018 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000104536 chsy1-201 10106856-10292018 protein_coding
  ENSDART00000149677 chsy1-001 10106856-10125078 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000104536
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000104536 3.817±0.32 3.316±2.27 1.823±0.72 0.532±0.00 1.667±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007CN CIL_0007CN_0001 CGP 7:10089247-10292018

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003007 IMP heart morphogenesis
GO:0006486 IEA protein glycosylation
GO:0008378 IEA galactosyltransferase activity
GO:0008593 IMP regulation of Notch signaling pathway
GO:0016020 IEA membrane
GO:0016757 IEA transferase activity, transferring glycosyl groups
GO:0016758 IEA transferase activity, transferring hexosyl groups
GO:0032580 IEA Golgi cisterna membrane
GO:0033339 IMP pectoral fin development
GO:0050650 IMP chondroitin sulfate proteoglycan biosynthetic process
GO:0060041 IMP retina development in camera-type eye
GO:0060042 IMP retina morphogenesis in camera-type eye
GO:0060536 IMP cartilage morphogenesis
GO:0060876 IMP semicircular canal formation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000131873 CHSY1 chondroitin sulfate synthase 1 protein_coding Homo_sapiens
ENSMUSG00000032640 Chsy1 chondroitin sulfate synthase 1 protein_coding Mus_musculus

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