C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine-rich repeats and calponin homology (CH) domain containing 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000619071 LRCH4-201 ENSG00000077454 9606 - 7:100574660-100582350 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonLiverMuscleOvaryENST00000619071
Transcript ID Brain Breast Colon Liver Muscle Ovary
ENST00000619071 0.424±0.00 2.432±0.00 1.622±0.00 0.800±0.00 0.921±0.00 8.595±5.65

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000177545 Gm20605-001 nonsense_mediated_decay Mus_musculus 0 985
ENSMUST00000175968 Lrch4-003 protein_coding Mus_musculus 0 985
ENSMUST00000176667 Lrch4-002 protein_coding Mus_musculus 0 985
ENSMUST00000031734 Lrch4-001 protein_coding Mus_musculus 0 985
ENSMUST00000177477 Lrch4-006 nonsense_mediated_decay Mus_musculus 0 736
ENSMUST00000176768 Lrch4-008 protein_coding Mus_musculus 0 226
ENSMUST00000176988 Lrch4-005 retained_intron Mus_musculus 0 204
ENSMUST00000176011 Lrch4-007 nonsense_mediated_decay Mus_musculus 2e-22 111

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