C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: KRR1, small subunit (SSU) processome component, homolog (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000612627 KRR1-201 ENSG00000111615 9606 - 12:75499835-75511608 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000612627
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000612627 7.720±0.00 4.160±0.00 5.621±1.62 5.755±0.00 4.478±1.26 3.578±0.00 5.165±0.00 5.233±1.85 3.052±0.00 8.411±1.22 7.734±0.00 10.180±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002B7 CIL_0002B7_0002 CGP 12:75480680-75511636

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000163048 Krr1-001 protein_coding Mus_musculus 0 1182
ENSMUST00000075924 Krr1-003 retained_intron Mus_musculus 0 676
ENSMUST00000174653 Krr1-004 protein_coding Mus_musculus 0 667
ENSMUST00000162678 Krr1-002 retained_intron Mus_musculus 0 217

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