C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lysine (K)-specific demethylase 4B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000611640 KDM4B-201 ENSG00000127663 9606 + 19:4969113-5153595 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000611640
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000611640 3.626±0.00 1.691±0.00 1.546±0.00 1.691±0.00 3.001±0.00 2.718±0.00 2.902±0.00 1.763±0.00 2.048±0.00 3.004±2.76 3.464±1.45 3.336±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005GV CIL_0005GV_0002 CGP 19:4903080-5153595
CIL_0005ON CIL_0005ON_0001 CGP 19:4969113-5340803

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000086835 Kdm4b-002 protein_coding Mus_musculus 0 1358
ENSMUST00000025036 Kdm4b-001 protein_coding Mus_musculus 0 1358
ENSMUST00000141507 Kdm4b-003 protein_coding Mus_musculus 0 1064
ENSDART00000034084 kdm4b-201 protein_coding Danio_rerio 0 702
ENSDART00000128161 kdm4b-001 protein_coding Danio_rerio 0 702
ENSMUST00000132363 Kdm4b-005 processed_transcript Mus_musculus 0 313

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