C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: somatostatin receptor 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000610913 SSTR3-001 ENSG00000278195 9606 - 22:37204238-37212322 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonLungOvaryTestisENST00000610913
Transcript ID Adipose Adrenal Brain Breast Colon Lung Ovary Testis
ENST00000610913 0.022±0.00 0.726±0.00 2.079±1.27 0.053±0.00 0.023±0.00 0.056±0.02 3.574±5.43 3.382±1.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00036N CIL_00036N_0001 CGP 22:37180167-37212322
CIL_00036V CIL_00036V_0001 CGP 22:37204238-37244448

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004930 IEA G-protein coupled receptor activity
GO:0004994 IEA somatostatin receptor activity
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0005929 IEA cilium
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007187 TAS G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger
GO:0007267 TAS cell-cell signaling
GO:0007283 IEA spermatogenesis
GO:0008285 TAS negative regulation of cell proliferation
GO:0008628 TAS hormone-mediated apoptotic signaling pathway
GO:0016021 IEA integral component of membrane
GO:0021549 IEA cerebellum development
GO:0030900 IEA forebrain development
GO:0031513 ISS nonmotile primary cilium
GO:0038170 IEA somatostatin signaling pathway
GO:0042594 IEA response to starvation
GO:0060170 IEA ciliary membrane
GO:0071385 IEA cellular response to glucocorticoid stimulus
GO:0071392 IEA cellular response to estradiol stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000053239 Sstr3-201 protein_coding Mus_musculus 0 1123
ENSMUST00000044299 Sstr1-201 protein_coding Mus_musculus 0.0000000007 71
ENSMUST00000110671 Sstr1-001 protein_coding Mus_musculus 0.0000000007 71

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