| Transcript ID | Brain | Muscle | Ovary |
|---|---|---|---|
| ENST00000599672 | 2.195±0.00 | 6.520±0.00 | 35.134±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | EMG1 N1-specific pseudouridine methyltransferase | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000599672  |
EMG1-001 |
ENSG00000126749 |
9606 | + |
12:6970893-6976619  |
protein_coding |
Expression Patterns
|
Conserved Regions |
|---|
| Gene is not located within a conserved region. |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003723 | ISS | RNA binding |
| GO:0005634 | ISS | nucleus |
| GO:0005730 | ISS | nucleolus |
| GO:0005737 | ISS | cytoplasm |
| GO:0006364 | ISS | rRNA processing |
| GO:0008168 | IEA | methyltransferase activity |
| GO:0019843 | IEA | rRNA binding |
| GO:0031167 | IDA | rRNA methylation |
| GO:0042274 | ISS | ribosomal small subunit biogenesis |
| GO:0044822 | IDA | poly(A) RNA binding |
| GO:0070037 | IDA | rRNA (pseudouridine) methyltransferase activity |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000004379
|
Emg1-001 | protein_coding | Mus_musculus | 0 | 763 |
|
ENSMUST00000142187
|
Emg1-003 | retained_intron | Mus_musculus | 0 | 510 |
|
ENSMUST00000141251
|
Emg1-002 | retained_intron | Mus_musculus | 0 | 444 |
|
ENSMUST00000135516
|
Lpcat3-002 | nonsense_mediated_decay | Mus_musculus | 0 | 342 |
|
ENSMUST00000004381
|
Lpcat3-001 | protein_coding | Mus_musculus | 0 | 342 |
|
ENSMUST00000125795
|
Emg1-004 | processed_transcript | Mus_musculus | 0 | 259 |
