C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 60, member C pseudogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000591086 FAM60CP-001 ENSG00000267742 9606 - 18:60016778-60017441 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderLiverOvaryPlacentaTestisENST00000591086
Transcript ID Bladder Liver Ovary Placenta Testis
ENST00000591086 0.082±0.00 0.073±0.00 0.047±0.01 0.033±0.00 0.068±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007FH CIL_0007FH_0001 CGP 18:59899948-60372775

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111562 Fam60a-007 protein_coding Mus_musculus 0 909
ENSMUST00000081956 Fam60a-002 protein_coding Mus_musculus 0 909
ENSMUST00000054080 Fam60a-001 protein_coding Mus_musculus 0 909
ENSMUST00000165914 Gm9027-001 processed_pseudogene Mus_musculus 0 907
ENSMUST00000132696 Fam60a-006 protein_coding Mus_musculus 0 630
ENSMUST00000139355 Fam60a-005 protein_coding Mus_musculus 0 392
ENSMUST00000146457 Fam60a-004 protein_coding Mus_musculus 0 224
ENSMUST00000143963 Fam60a-008 retained_intron Mus_musculus 2.00386e-43 180

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