| Transcript ID | Brain | Colon | Heart | Liver |
|---|---|---|---|---|
| ENST00000587487 | 1.380±0.00 | 3.131±0.00 | 0.641±0.00 | 0.977±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | tRNA methyltransferase 1 homolog (S. cerevisiae) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000587487  |
TRMT1-012 |
ENSG00000104907 |
9606 | - |
19:13109645-13116702  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007VV | CIL_0007VV_0001 | VISTA | 19:12752697-13356541 |
| CIL_0007ZV | CIL_0007ZV_0001 | VISTA | 19:12767682-13372012 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003723 | IEA | RNA binding |
| GO:0004809 | IEA | tRNA (guanine-N2-)-methyltransferase activity |
| GO:0008033 | IEA | tRNA processing |
| GO:0030488 | IEA | tRNA methylation |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000109768
|
Trmt1-003 | protein_coding | Mus_musculus | 0 | 782 |
|
ENSMUST00000109767
|
Trmt1-002 | protein_coding | Mus_musculus | 0 | 782 |
|
ENSMUST00000001974
|
Trmt1-001 | protein_coding | Mus_musculus | 0 | 782 |
|
ENSMUST00000137953
|
Trmt1-009 | retained_intron | Mus_musculus | 0 | 375 |
|
ENSMUST00000175884
|
Trmt1-029 | nonsense_mediated_decay | Mus_musculus | 4.00001e-41 | 172 |
|
ENSMUST00000125370
|
Trmt1-018 | protein_coding | Mus_musculus | 6e-34 | 148 |
|
ENSMUST00000138300
|
Trmt1-016 | retained_intron | Mus_musculus | 5e-20 | 102 |
|
ENSMUST00000175704
|
Trmt1-028 | retained_intron | Mus_musculus | 0.000000000000005 | 86 |
