C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1 pseudogene 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000573189 ATP5A1P3-001 ENSG00000263232 9606 - 16:72005037-72006543 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryTestisENST00000573189
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000573189 0.035±0.00 0.027±0.00 0.203±0.00 0.112±0.00 0.036±0.00 0.115±0.06 0.036±0.00 0.059±0.02 0.156±0.13 0.055±0.00 0.167±0.09 0.153±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098E CIL_00098E_0001 VISTA 16:71920667-72521926
CIL_00098B CIL_00098B_0001 VISTA 16:71941307-72542883

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114748 Atp5a1-002 protein_coding Mus_musculus 0 1474
ENSMUST00000026495 Atp5a1-001 protein_coding Mus_musculus 0 1474
ENSMUST00000135678 Atp5a1-003 nonsense_mediated_decay Mus_musculus 0 237

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