C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB40C, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000561781 RAB40C-002 ENSG00000197562 9606 + 16:625614-629272 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryENST00000561781
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary
ENST00000561781 2.643±0.00 2.220±0.00 1.202±0.00 1.633±0.00 0.248±0.11 0.181±0.00 0.644±0.00 1.689±0.87 2.369±0.00 3.393±0.71

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000179998 Rab40c-202 protein_coding Mus_musculus 0 688
ENSMUST00000026826 Rab40c-201 protein_coding Mus_musculus 0 688
ENSMUST00000166619 Rab40c-002 processed_transcript Mus_musculus 0 688
ENSMUST00000167626 Rab40c-001 protein_coding Mus_musculus 0 688
ENSMUST00000166146 Rab40c-003 nonsense_mediated_decay Mus_musculus 0 688
ENSMUST00000167018 Rab40c-005 protein_coding Mus_musculus 0 660
ENSMUST00000164982 Rab40c-004 protein_coding Mus_musculus 0 603

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