C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PIF1 5'-to-3' DNA helicase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000560444 PIF1-004 ENSG00000140451 9606 - 15:64821590-64825625 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000560444
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000560444 0.348±0.00 0.920±0.00 0.383±0.00 0.270±0.00 0.471±0.00 0.164±0.00 0.579±0.00 0.017±0.00 0.210±0.00 0.160±0.00 0.222±0.00 0.440±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RY CIL_0007RY_0001 VISTA 15:64785331-65389080

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000152885 Pif1-006 retained_intron Mus_musculus 0 641
ENSMUST00000152529 Pif1-005 retained_intron Mus_musculus 0 641
ENSMUST00000131483 Pif1-004 protein_coding Mus_musculus 2e-36 158
ENSMUST00000154970 Pif1-003 nonsense_mediated_decay Mus_musculus 2e-36 158
ENSMUST00000134538 Pif1-002 protein_coding Mus_musculus 2e-36 158
ENSMUST00000047099 Pif1-001 protein_coding Mus_musculus 2e-36 158

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