C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cut-like homeobox 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000558469 CUX1-020 ENSG00000257923 9606 + 7:101818921-102111726 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonKidneyLungMuscleOvaryENST00000558469
Transcript ID Colon Kidney Lung Muscle Ovary
ENST00000558469 14.449±0.00 4.701±0.00 13.856±0.00 9.191±0.00 20.834±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002FZ CIL_0002FZ_0002 CGP 7:101815904-102321711

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000176501 Cux1-007 retained_intron Mus_musculus 0 612
ENSMUST00000175975 Cux1-008 protein_coding Mus_musculus 0 612
ENSMUST00000004097 Cux1-001 protein_coding Mus_musculus 0 612
ENSMUST00000177297 Cux1-009 nonsense_mediated_decay Mus_musculus 0 612
ENSMUST00000176745 Cux1-006 protein_coding Mus_musculus 0 612
ENSMUST00000176216 Cux1-004 protein_coding Mus_musculus 0 612
ENSMUST00000176172 Cux1-011 protein_coding Mus_musculus 0 610
ENSMUST00000176778 Cux1-005 protein_coding Mus_musculus 0 610
ENSMUST00000175918 Cux1-003 nonsense_mediated_decay Mus_musculus 0 477
ENSMUST00000176486 Cux1-012 protein_coding Mus_musculus 0 233

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