C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, CCHC domain containing 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000543897 ZCCHC8-002 ENSG00000033030 9606 - 12:122472870-122500595 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalENST00000543897
Transcript ID Adrenal
ENST00000543897 0.914±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002ZD CIL_0002ZD_0001 CGP 12:122271432-122500595
CIL_0002PD CIL_0002PD_0001 CGP 12:122472870-122527000

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000398 IC mRNA splicing, via spliceosome
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0008270 IEA zinc ion binding
GO:0044822 IDA poly(A) RNA binding
GO:0071013 IDA catalytic step 2 spliceosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031376 Zcchc8-201 protein_coding Mus_musculus 0 1229
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.0000001 64
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.0003 53

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