C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: calcium channel, voltage-dependent, L type, alpha 1C subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000543114 CACNA1C-034 ENSG00000151067 9606 + 12:1970786-2115384 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartENST00000543114
Transcript ID Heart
ENST00000543114 25.833±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003XI CIL_0003XI_0002 CGP 12:1820267-2004535
CIL_0003XH CIL_0003XH_0002 CGP 12:1946054-2697950

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005245 IEA voltage-gated calcium channel activity
GO:0005891 IEA voltage-gated calcium channel complex
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000189057 Cacna1c-003 processed_transcript Mus_musculus 0 272
ENSMUST00000187474 Cacna1c-008 protein_coding Mus_musculus 0 272
ENSMUST00000187940 Cacna1c-002 protein_coding Mus_musculus 0 272
ENSMUST00000190285 Cacna1c-007 protein_coding Mus_musculus 0 265
ENSMUST00000186889 Cacna1c-001 protein_coding Mus_musculus 0 265

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