C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hyaluronan binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000542051 HABP2-201 ENSG00000148702 9606 + 10:113550837-113589602 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainKidneyLiverLungOvaryPlacentaENST00000542051
Transcript ID Adrenal Brain Kidney Liver Lung Ovary Placenta
ENST00000542051 0.017±0.00 0.148±0.01 8.438±0.00 37.958±0.00 0.302±0.00 1.024±0.00 0.121±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006OX CIL_0006OX_0001 CGP 10:112950250-113589602
CIL_0006OW CIL_0006OW_0001 CGP 10:113550837-113664127

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004252 IEA serine-type endopeptidase activity
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005539 TAS glycosaminoglycan binding
GO:0005576 NAS extracellular region
GO:0005615 TAS extracellular space
GO:0006508 IEA proteolysis
GO:0007155 TAS cell adhesion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000078284 Habp2-001 protein_coding Mus_musculus 0 1349
ENSMUST00000095948 Habp2-002 protein_coding Mus_musculus 0 1338
ENSMUST00000166049 Habp2-005 protein_coding Mus_musculus 0 1308
ENSMUST00000163502 Habp2-006 protein_coding Mus_musculus 0 573
ENSMUST00000171341 Habp2-004 nonsense_mediated_decay Mus_musculus 0 547
ENSMUST00000165522 Habp2-007 nonsense_mediated_decay Mus_musculus 0 481

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