C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Putative short transient receptor potential channel 2-like protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000532852 RP11-849H4.2-009 ENSG00000254469 9606 - 11:71865509-71918957 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastHeartKidneyLiverPlacentaTestisENST00000532852
Transcript ID Adrenal Brain Breast Heart Kidney Liver Placenta Testis
ENST00000532852 0.688±0.00 0.355±0.00 0.202±0.00 0.338±0.00 0.398±0.00 0.092±0.00 0.203±0.12 0.639±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000012 IEA single strand break repair
GO:0003684 IEA damaged DNA binding
GO:0005634 IEA nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000094130 Xndc1-002 protein_coding Mus_musculus 0 427
ENSMUST00000153176 Xndc1-004 retained_intron Mus_musculus 0 427
ENSMUST00000106950 Xndc1-001 protein_coding Mus_musculus 0 427
ENSMUST00000094129 Trpc2-201 protein_coding Mus_musculus 0 427
ENSMUST00000084843 Trpc2-001 protein_coding Mus_musculus 0 427
ENSMUST00000123372 Trpc2-002 nonsense_mediated_decay Mus_musculus 0 427
ENSMUST00000146450 Xndc1-007 protein_coding Mus_musculus 0 403

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