C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glutamate receptor, ionotropic, kainate 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000527524 GRIK4-001 ENSG00000149403 9606 + 11:120511759-120988904 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonKidneyLiverLungOvaryPlacentaTestisENST00000527524
Transcript ID Brain Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000527524 0.850±0.00 0.049±0.00 0.023±0.00 0.018±0.00 0.163±0.00 0.374±0.03 0.034±0.00 0.181±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004970 IEA ionotropic glutamate receptor activity
GO:0005234 IBA:IEA extracellular-glutamate-gated ion channel activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006810 TAS transport
GO:0007215 TAS glutamate receptor signaling pathway
GO:0007268 TAS synaptic transmission
GO:0015277 IBA kainate selective glutamate receptor activity
GO:0016020 IEA membrane
GO:0030054 IEA cell junction
GO:0030424 IEA axon
GO:0030425 IBA dendrite
GO:0031960 IEA response to corticosteroid
GO:0032983 IBA kainate selective glutamate receptor complex
GO:0034220 IBA ion transmembrane transport
GO:0035235 IBA ionotropic glutamate receptor signaling pathway
GO:0035249 IBA synaptic transmission, glutamatergic
GO:0042734 IBA presynaptic membrane
GO:0043195 IEA terminal bouton
GO:0043204 IEA perikaryon
GO:0045202 IEA synapse
GO:0045211 IBA postsynaptic membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114865 Grik4-001 protein_coding Mus_musculus 0 4196
ENSMUST00000034515 Grik4-201 protein_coding Mus_musculus 0 4060
ENSDART00000035812 grik4-201 protein_coding Danio_rerio 0 1439
ENSDART00000156760 grik4-001 protein_coding Danio_rerio 0 1439
ENSDART00000114472 GRIK5 (2 of 2)-201 protein_coding Danio_rerio 0 553
ENSDART00000114766 grik5-201 protein_coding Danio_rerio 3e-40 172
ENSDART00000122055 grik5-202 protein_coding Danio_rerio 3e-40 172

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