C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: general transcription factor IIH, polypeptide 2, 44kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000521942 GTF2H2-008 ENSG00000145736 9606 - 5:71047456-71062799 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000521942
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000521942 0.174±0.00 0.342±0.00 0.120±0.00 0.335±0.08 0.585±0.04 0.660±0.44 0.297±0.04 0.771±0.00 0.299±0.21 0.851±0.49 0.088±0.00 0.416±0.24 0.199±0.12 0.372±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004ZF CIL_0004ZF_0001 CGP 5:70968483-71067689

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000066984 Gtf2h2-001 protein_coding Mus_musculus 0 902
ENSMUST00000145266 Gtf2h2-003 nonsense_mediated_decay Mus_musculus 0 902
ENSMUST00000066940 Gtf2h2-006 protein_coding Mus_musculus 0 671
ENSMUST00000134842 Gtf2h2-002 nonsense_mediated_decay Mus_musculus 0 523
ENSMUST00000142182 Gtf2h2-004 retained_intron Mus_musculus 0 473
ENSMUST00000152049 Gtf2h2-007 processed_transcript Mus_musculus 0 361
ENSMUST00000147229 Gtf2h2-005 retained_intron Mus_musculus 0 361

Loading