C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding motif protein 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000506523 RBM4-009 ENSG00000173933 9606 + 11:66638718-66649930 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003YM CIL_0003YM_0004 CGP 11:66616626-66666682
CIL_0003YM CIL_0003YM_0003 CGP 11:66638617-66677921

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000182200 Rbm4b-002 nonsense_mediated_decay Mus_musculus 0 608
ENSMUST00000036744 Rbm4b-001 protein_coding Mus_musculus 0 608
ENSMUST00000182065 Rbm4b-003 retained_intron Mus_musculus 0 608
ENSMUST00000183008 Rbm4b-005 processed_transcript Mus_musculus 0 608
ENSMUST00000182821 Rbm4b-004 retained_intron Mus_musculus 0 608
ENSMUST00000179189 Rbm4-004 protein_coding Mus_musculus 0 597
ENSMUST00000164209 Rbm4-006 protein_coding Mus_musculus 0 597
ENSMUST00000178727 Gm21992-003 retained_intron Mus_musculus 0 586
ENSMUST00000172000 Gm21992-001 protein_coding Mus_musculus 0 586
ENSMUST00000179820 Rbm4-003 retained_intron Mus_musculus 0 586
ENSMUST00000164376 Rbm4-005 protein_coding Mus_musculus 0 586
ENSMUST00000178615 Rbm4-002 protein_coding Mus_musculus 0 586
ENSMUST00000180248 Rbm4-001 protein_coding Mus_musculus 0 586
ENSMUST00000177776 Gm21992-006 processed_transcript Mus_musculus 0 276

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