C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sorting nexin 5 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000505757 SNX5P1-001 ENSG00000249858 9606 + 4:76344550-76345590 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonLungMuscleTestisENST00000505757
Transcript ID Breast Colon Lung Muscle Testis
ENST00000505757 0.222±0.00 0.333±0.00 0.238±0.00 0.030±0.00 0.055±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008VL CIL_0008VL_0001 VISTA 4:76031495-76631676
CIL_00071P CIL_00071P_0001 CGP 4:76306026-76421868
CIL_00071O CIL_00071O_0001 CGP 4:76312997-76783253

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028909 Snx5-003 protein_coding Mus_musculus 0 422
ENSMUST00000110030 Snx5-001 protein_coding Mus_musculus 0 422

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