C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000505144 CTD-2325A15.3-001 ENSG00000249092 9606 - 5:42892319-42892817 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000505144
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000505144 0.449±0.00 0.388±0.13 0.181±0.00 0.331±0.00 0.027±0.00 0.259±0.02 0.054±0.00 0.084±0.00 0.052±0.00 0.061±0.00 0.100±0.00 0.243±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000175860 Gm6061-001 processed_pseudogene Mus_musculus 0 592
ENSMUST00000132846 Ppia-001 protein_coding Mus_musculus 0 588
ENSMUST00000075723 Gm10123-001 processed_pseudogene Mus_musculus 0 586
ENSMUST00000120318 Gm13493-001 processed_pseudogene Mus_musculus 0 571
ENSMUST00000090749 Ppia-005 processed_transcript Mus_musculus 0 564
ENSMUST00000077747 Gm9234-201 processed_pseudogene Mus_musculus 0 560
ENSMUST00000119740 Gm12728-001 translated_processed_pseudogene Mus_musculus 0 547
ENSMUST00000119389 Gm14046-001 processed_pseudogene Mus_musculus 0 536
ENSMUST00000099961 Gm6043-201 processed_pseudogene Mus_musculus 0 532
ENSMUST00000155824 Ppia-003 retained_intron Mus_musculus 0 529
ENSMUST00000137829 Ppia-002 retained_intron Mus_musculus 0 496
ENSMUST00000177265 Gm5777-001 processed_pseudogene Mus_musculus 0 488
ENSMUST00000120735 Gm5883-001 processed_pseudogene Mus_musculus 0 466
ENSMUST00000119751 Gm11469-001 processed_pseudogene Mus_musculus 0 466
ENSMUST00000172723 Gm5967-001 processed_pseudogene Mus_musculus 0 457
ENSMUST00000186816 RP23-215C21.3-001 processed_pseudogene Mus_musculus 0 453
ENSMUST00000118678 Gm13679-001 processed_pseudogene Mus_musculus 0 448

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