C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SEC24 family member B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000504968 SEC24B-003 ENSG00000138802 9606 + 4:109433772-109539746 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonMuscleOvaryTestisENST00000504968
Transcript ID Bladder Brain Colon Muscle Ovary Testis
ENST00000504968 1.622±0.00 1.485±0.00 1.152±0.00 3.212±0.00 3.105±0.00 3.317±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0001843 IEA neural tube closure
GO:0002093 IEA auditory receptor cell morphogenesis
GO:0002474 TAS antigen processing and presentation of peptide antigen via MHC class I
GO:0003151 IEA outflow tract morphogenesis
GO:0005215 TAS transporter activity
GO:0005515 IPI protein binding
GO:0005789 TAS endoplasmic reticulum membrane
GO:0005829 TAS cytosol
GO:0006886 IEA intracellular protein transport
GO:0006888 TAS:IEA ER to Golgi vesicle-mediated transport
GO:0008270 IEA zinc ion binding
GO:0012507 TAS ER to Golgi transport vesicle membrane
GO:0016020 TAS membrane
GO:0016192 TAS vesicle-mediated transport
GO:0018279 TAS protein N-linked glycosylation via asparagine
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0021747 IEA cochlear nucleus development
GO:0030127 IEA COPII vesicle coat
GO:0030134 IEA ER to Golgi transport vesicle
GO:0035909 IEA aorta morphogenesis
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0048208 TAS COPII vesicle coating
GO:0060088 IEA auditory receptor cell stereocilium organization
GO:0060425 IEA lung morphogenesis
GO:0060463 IEA lung lobe morphogenesis
GO:0060982 IEA coronary artery morphogenesis
GO:0061024 TAS membrane organization
GO:0061156 IEA pulmonary artery morphogenesis
GO:0072358 IEA cardiovascular system development
GO:0090178 IEA regulation of establishment of planar polarity involved in neural tube closure
GO:1901301 IEA regulation of cargo loading into COPII-coated vesicle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000001079 Sec24b-001 protein_coding Mus_musculus 0 2806
ENSMUST00000165873 Sec24b-002 protein_coding Mus_musculus 0 2002
ENSMUST00000172324 Sec24b-007 retained_intron Mus_musculus 0 337
ENSMUST00000168675 Sec24b-003 protein_coding Mus_musculus 0 207

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