C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: regulating synaptic membrane exocytosis 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000504942 RIMS2-001 ENSG00000176406 9606 + 8:103500748-104014615 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartKidneyOvaryTestisENST00000504942
Transcript ID Bladder Brain Colon Heart Kidney Ovary Testis
ENST00000504942 0.059±0.00 5.918±0.00 0.079±0.00 0.018±0.01 0.085±0.00 0.209±0.00 0.334±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00060F CIL_00060F_0001 CGP 8:103414714-104256094

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0006886 IEA intracellular protein transport
GO:0017137 IEA Rab GTPase binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042917 Rims2-201 protein_coding Mus_musculus 0 1991
ENSMUST00000082054 Rims2-202 protein_coding Mus_musculus 0 1733
ENSDART00000079296 rims2a-201 protein_coding Danio_rerio 0 350
ENSDART00000121434 protein_coding Danio_rerio 0 322

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