C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lamin B1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000504788 LMNB1-009 ENSG00000113368 9606 + 5:126777153-126836571 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000504788
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000504788 1.310±0.00 2.680±0.00 0.731±0.06 3.702±0.00 2.648±2.06 0.081±0.00 0.819±0.00 1.752±0.49 0.096±0.00 5.061±2.92 3.187±2.50 3.751±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00041Q CIL_00041Q_0001 CGP 5:126631722-126837020
CIL_0007S2 CIL_0007S2_0001 VISTA 5:126699007-127301374
CIL_00041J CIL_00041J_0001 CGP 5:126776623-127030808

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025486 Lmnb1-001 protein_coding Mus_musculus 0 1866
ENSMUST00000128651 Lmnb1-002 retained_intron Mus_musculus 0 627

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