C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000498103 RP11-592N21.1-001 ENSG00000212664 9606 - 15:71341158-71341712 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000498103
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000498103 0.026±0.00 0.111±0.00 0.275±0.11 0.182±0.00 0.092±0.02 0.113±0.00 0.081±0.03 0.284±0.10 0.049±0.00 0.359±0.11 0.280±0.00 0.218±0.07

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121001 Rpl17-ps5-001 processed_pseudogene Mus_musculus 0 710
ENSMUST00000118924 Rpl17-ps8-001 processed_pseudogene Mus_musculus 0 704
ENSMUST00000079716 Rpl17-201 protein_coding Mus_musculus 0 704
ENSMUST00000119541 Rpl17-ps9-001 processed_pseudogene Mus_musculus 0 693
ENSMUST00000120241 Rpl17-ps4-001 processed_pseudogene Mus_musculus 0 688
ENSMUST00000119383 Rpl17-ps10-001 processed_pseudogene Mus_musculus 0 682
ENSMUST00000085340 Gm10268-201 processed_pseudogene Mus_musculus 0 682
ENSMUST00000117614 Gm11531-001 processed_pseudogene Mus_musculus 0 665
ENSMUST00000173076 Gm3617-001 processed_pseudogene Mus_musculus 0 660
ENSMUST00000119156 Rpl17-ps1-001 processed_pseudogene Mus_musculus 0 628
ENSMUST00000185778 RP24-178O17.1-001 processed_pseudogene Mus_musculus 0 608
ENSMUST00000160969 Gm15795-001 processed_pseudogene Mus_musculus 0 606
ENSMUST00000119731 Gm4986-001 processed_pseudogene Mus_musculus 0 599
ENSMUST00000121305 Gm11472-001 processed_pseudogene Mus_musculus 0 599
ENSMUST00000162765 Gm9719-001 processed_pseudogene Mus_musculus 0 599
ENSMUST00000120579 Gm11343-001 processed_pseudogene Mus_musculus 0 586
ENSMUST00000164501 Gm17214-001 processed_pseudogene Mus_musculus 0 575
ENSMUST00000185744 RP23-304F24.3-001 processed_pseudogene Mus_musculus 0 540
ENSMUST00000187749 RP23-305F24.2-001 processed_pseudogene Mus_musculus 0 460
ENSMUST00000164923 Gm5277-201 protein_coding Mus_musculus 0 455
ENSMUST00000117144 Gm6429-001 processed_pseudogene Mus_musculus 0 414
ENSMUST00000162128 Gm16111-001 processed_pseudogene Mus_musculus 0 344

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