C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000495560 AC090453.1-001 ENSG00000243503 9606 - 8:36987977-36988412 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeMuscleTestisENST00000495560
Transcript ID Adipose Muscle Testis
ENST00000495560 0.030±0.00 0.027±0.00 0.064±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SH CIL_0007SH_0001 VISTA 8:36800333-37401205
CIL_0007LB CIL_0007LB_0001 UCNEbase 8:36880130-37521142

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118781 Gm11826-001 processed_pseudogene Mus_musculus 0 316
ENSMUST00000118533 Gm15772-001 processed_pseudogene Mus_musculus 0 305
ENSMUST00000167436 Rpl26-201 protein_coding Mus_musculus 0 300
ENSMUST00000073471 Rpl26-001 protein_coding Mus_musculus 0 300
ENSMUST00000183196 Gm10136-001 processed_pseudogene Mus_musculus 0 294
ENSMUST00000101014 Rpl26-002 protein_coding Mus_musculus 0 267
ENSMUST00000085379 Rpl26-ps2-201 processed_pseudogene Mus_musculus 0 261
ENSMUST00000122220 Rpl26-ps5-001 processed_pseudogene Mus_musculus 0 255
ENSMUST00000170279 Rpl26-ps4-201 processed_pseudogene Mus_musculus 0 255
ENSMUST00000128952 Rpl26-003 protein_coding Mus_musculus 0 233
ENSMUST00000118045 Gm15896-001 processed_pseudogene Mus_musculus 0 226
ENSMUST00000122414 Gm11506-001 processed_pseudogene Mus_musculus 3e-29 132
ENSMUST00000160695 Gm16101-001 processed_pseudogene Mus_musculus 3e-29 132

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