Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	ribosomal protein S2 pseudogene 24
ENST00000494599	RPS2P24-001	ENSG00000244019	9606	+	5:77545397-77546266	processed_pseudogene

Expression Patterns

Transcript ID	Adipose	Adrenal	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENST00000494599	0.121±0.00	0.077±0.00	0.352±0.00	0.024±0.00	0.054±0.00	0.046±0.00	0.281±0.00	0.311±0.00	0.034±0.00	0.058±0.00	0.191±0.00

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_000979	CIL_000979_0001	VISTA	5:77339400-77940441
CIL_00091A	CIL_00091A_0001	VISTA	5:77345011-77945571
CIL_0008DK	CIL_0008DK_0001	VISTA	5:77424780-78026683
CIL_00091B	CIL_00091B_0001	VISTA	5:77543897-78144918

Gene Ontology
GO ID	Evidence Type	GO Description
No GO terms available.

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENSMUST00000121190	Gm7860-001	processed_pseudogene	Mus_musculus	0	665
ENSMUST00000146791	Gm12091-001	processed_pseudogene	Mus_musculus	0	658
ENSMUST00000117512	Gm7222-001	processed_pseudogene	Mus_musculus	0	593
ENSMUST00000121414	Rps2-ps9-001	processed_pseudogene	Mus_musculus	0	592
ENSMUST00000119578	Gm11643-001	processed_pseudogene	Mus_musculus	0	521
ENSDART00000110842	rps2-201	protein_coding	Danio_rerio	0	496
ENSDART00000138107	rps2-001	protein_coding	Danio_rerio	0	496
ENSMUST00000121348	Gm7638-001	processed_pseudogene	Mus_musculus	0	446
ENSMUST00000190239	RP23-16N14.5-001	processed_pseudogene	Mus_musculus	0	429
ENSMUST00000183369	Gm18014-001	processed_pseudogene	Mus_musculus	0	427
ENSMUST00000119539	Gm14234-001	processed_pseudogene	Mus_musculus	0	409
ENSMUST00000116032	Gm16073-001	processed_pseudogene	Mus_musculus	0	372
ENSMUST00000116022	Gm15846-001	processed_pseudogene	Mus_musculus	0	309

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