C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L5 pseudogene 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000493817 RPL5P3-001 ENSG00000242276 9606 - 15:71063101-71063989 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLungMuscleOvaryTestisENST00000493817
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Testis
ENST00000493817 0.038±0.00 0.079±0.00 0.058±0.00 0.026±0.00 0.088±0.00 0.126±0.04 0.052±0.00 0.104±0.00 0.012±0.00 0.035±0.00 0.046±0.00 0.037±0.03

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000071523 Gm15500-001 transcribed_processed_pseudogene Mus_musculus 0 1068
ENSMUST00000071641 Gm15500-002 processed_transcript Mus_musculus 0 1068
ENSMUST00000082223 Rpl5-001 protein_coding Mus_musculus 0 1068
ENSMUST00000121367 Rpl5-ps1-001 processed_pseudogene Mus_musculus 0 1024
ENSMUST00000119057 Rpl5-ps2-001 processed_pseudogene Mus_musculus 0 1018
ENSMUST00000153590 Rpl5-002 protein_coding Mus_musculus 0 756
ENSMUST00000123183 Rpl5-003 retained_intron Mus_musculus 0 632
ENSMUST00000140659 Rpl5-005 retained_intron Mus_musculus 0 442
ENSMUST00000121897 Gm15877-001 processed_pseudogene Mus_musculus 0 370
ENSMUST00000129944 Rpl5-004 retained_intron Mus_musculus 0 270
ENSMUST00000151767 Rpl5-006 retained_intron Mus_musculus 0 230

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