C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein A1 pseudogene 23
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000491091 HNRNPA1P23-001 ENSG00000240236 9606 + 3:122317609-122318741 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000491091
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000491091 0.022±0.00 0.059±0.00 0.094±0.00 0.023±0.00 0.011±0.00 0.012±0.00 0.011±0.00 0.053±0.00 0.021±0.01 0.016±0.00 0.021±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000036004 Hnrnpa1-201 protein_coding Mus_musculus 0 1114
ENSMUST00000118970 Gm16216-001 processed_pseudogene Mus_musculus 0 1031
ENSMUST00000050143 Gm7729-001 unprocessed_pseudogene Mus_musculus 0 763
ENSMUST00000168019 Gm10052-001 processed_pseudogene Mus_musculus 0 752
ENSMUST00000087351 Hnrnpa1-202 protein_coding Mus_musculus 0 752
ENSMUST00000117081 Gm5643-001 processed_pseudogene Mus_musculus 0 723
ENSMUST00000022493 Gm5803-001 processed_pseudogene Mus_musculus 0 691
ENSMUST00000181363 Gm8652-001 processed_pseudogene Mus_musculus 0 673
ENSMUST00000129154 Hnrnpa1l2-ps-001 processed_pseudogene Mus_musculus 0 651
ENSMUST00000040649 AC165425.1-201 pseudogene Mus_musculus 0 588
ENSMUST00000184038 Gm5269-001 translated_processed_pseudogene Mus_musculus 0 468
ENSMUST00000119097 Gm13418-001 processed_pseudogene Mus_musculus 0 446
ENSMUST00000119387 Gm12458-001 processed_pseudogene Mus_musculus 0 387
ENSMUST00000178732 RP24-383H12.1-001 processed_pseudogene Mus_musculus 0 350
ENSMUST00000120205 Gm13297-001 processed_pseudogene Mus_musculus 0 350
ENSMUST00000122005 Gm12382-001 processed_pseudogene Mus_musculus 0 206
ENSMUST00000183590 Gm5269-002 protein_coding Mus_musculus 3e-19 100

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