C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation elongation factor 1 alpha 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000490569 EEF1A1-008 ENSG00000156508 9606 - 6:73517519-73520059 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLungOvaryPlacentaTestisENST00000490569
Transcript ID Brain Lung Ovary Placenta Testis
ENST00000490569 68.113±0.00 234.754±0.00 393.650±0.00 516.078±0.00 119.854±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006PO CIL_0006PO_0001 CGP 6:73461578-73523797
CIL_0006PR CIL_0006PR_0001 CGP 6:73515750-73654155

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042235 Eef1a1-001 protein_coding Mus_musculus 0 1476
ENSMUST00000118928 Gm13456-001 processed_pseudogene Mus_musculus 0 1321
ENSMUST00000187672 RP23-307G23.3-001 processed_pseudogene Mus_musculus 0 1310
ENSMUST00000118650 Gm6767-001 processed_pseudogene Mus_musculus 0 1245
ENSMUST00000121596 Gm12912-001 processed_pseudogene Mus_musculus 0 1210
ENSMUST00000161562 Gm5822-001 processed_pseudogene Mus_musculus 0 1184
ENSMUST00000144523 Eef1a1-005 retained_intron Mus_musculus 0 1125
ENSMUST00000154207 Eef1a1-008 protein_coding Mus_musculus 0 1092
ENSMUST00000167498 Gm6548-001 processed_pseudogene Mus_musculus 0 1074
ENSMUST00000129380 Eef1a1-004 retained_intron Mus_musculus 0 944
ENSMUST00000126614 Eef1a1-006 retained_intron Mus_musculus 0 922
ENSMUST00000156988 Eef1a1-003 protein_coding Mus_musculus 0 811
ENSMUST00000150960 Eef1a1-002 retained_intron Mus_musculus 0 730
ENSMUST00000189923 RP23-478L14.1-001 processed_pseudogene Mus_musculus 0 494
ENSMUST00000189839 RP24-342F15.1-001 processed_pseudogene Mus_musculus 0 466
ENSMUST00000143570 Eef1a1-007 processed_transcript Mus_musculus 0 313
ENSMUST00000162135 Gm15796-001 processed_pseudogene Mus_musculus 0 278
ENSMUST00000187291 RP23-465C10.2-001 processed_pseudogene Mus_musculus 0 230

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