| Transcript ID | Breast | Liver | Lung | Ovary |
|---|---|---|---|---|
| ENST00000483328 | 0.768±0.00 | 0.836±0.00 | 0.784±0.00 | 0.848±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | tRNA-yW synthesizing protein 5 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000483328  |
TYW5-005 |
ENSG00000162971 |
9606 | - |
2:199929975-199955736  |
nonsense_mediated_decay |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0002K2 | CIL_0002K2_0001 | CGP | 2:199911256-199955935 |
| CIL_0000JI | CIL_0000JI_0002 | CGP | 2:199929975-200008540 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000049 | IEA | tRNA binding |
| GO:0016706 | IEA | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors |
| GO:0031591 | IEA | wybutosine biosynthetic process |
| GO:0055114 | IEA | oxidation-reduction process |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000079998
|
Tyw5-004 | nonsense_mediated_decay | Mus_musculus | 0 | 1059 |
|
ENSMUST00000162686
|
Tyw5-001 | protein_coding | Mus_musculus | 0 | 972 |
|
ENSMUST00000160837
|
Tyw5-007 | protein_coding | Mus_musculus | 0 | 728 |
|
ENSMUST00000097732
|
Tyw5-002 | retained_intron | Mus_musculus | 0 | 671 |
|
ENSMUST00000161780
|
Tyw5-003 | protein_coding | Mus_musculus | 0 | 542 |
|
ENSMUST00000161727
|
Tyw5-010 | retained_intron | Mus_musculus | 0 | 516 |
|
ENSMUST00000162663
|
Tyw5-011 | processed_transcript | Mus_musculus | 0 | 442 |
|
ENSMUST00000160118
|
Tyw5-006 | nonsense_mediated_decay | Mus_musculus | 0 | 392 |
|
ENSMUST00000163039
|
Tyw5-009 | processed_transcript | Mus_musculus | 0 | 372 |
|
ENSMUST00000161092
|
Tyw5-008 | retained_intron | Mus_musculus | 0 | 287 |
