C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: metastasis associated 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000481012 MTA1-009 ENSG00000182979 9606 + 14:105438672-105463231 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonLungOvaryPlacentaTestisENST00000481012
Transcript ID Brain Breast Colon Lung Ovary Placenta Testis
ENST00000481012 1.783±0.00 3.457±0.00 1.648±0.00 1.806±0.00 8.485±0.00 7.137±0.00 32.905±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004Q6 CIL_0004Q6_0001 CGP 14:105300563-105450106
CIL_0006H9 CIL_0006H9_0001 CGP 14:105398579-105470729
CIL_0006HA CIL_0006HA_0001 CGP 14:105419820-105480170

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109727 Mta1-202 protein_coding Mus_musculus 0 784
ENSMUST00000109726 Mta1-201 protein_coding Mus_musculus 0 784
ENSMUST00000130926 Mta1-004 processed_transcript Mus_musculus 0 784
ENSMUST00000069690 Mta1-003 protein_coding Mus_musculus 0 784
ENSMUST00000109723 Mta1-002 protein_coding Mus_musculus 0 784
ENSMUST00000009099 Mta1-001 protein_coding Mus_musculus 0 784
ENSDART00000122665 mta3-004 protein_coding Danio_rerio 0 285
ENSDART00000127454 mta3-001 protein_coding Danio_rerio 0 285
ENSDART00000077180 mta3-002 protein_coding Danio_rerio 0 285
ENSMUST00000177069 Mta3-003 nonsense_mediated_decay Mus_musculus 0 274
ENSMUST00000112352 Mta3-004 protein_coding Mus_musculus 0 274
ENSMUST00000112349 Mta3-005 protein_coding Mus_musculus 0 274
ENSMUST00000112350 Mta3-002 protein_coding Mus_musculus 0 274
ENSMUST00000176816 Mta3-007 protein_coding Mus_musculus 0 268
ENSMUST00000067826 Mta3-001 protein_coding Mus_musculus 0 268
ENSDART00000156281 MTA1-003 retained_intron Danio_rerio 0 226
ENSDART00000045583 MTA1-002 protein_coding Danio_rerio 0 222
ENSDART00000157183 MTA1-001 retained_intron Danio_rerio 5e-31 139

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