C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000477507 CTD-2186M15.1-001 ENSG00000230829 9606 + 5:32221932-32222347 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartLiverMuscleTestisENST00000477507
Transcript ID Adrenal Brain Breast Colon Heart Liver Muscle Testis
ENST00000477507 0.260±0.00 0.077±0.00 0.074±0.00 0.173±0.00 0.034±0.00 0.099±0.00 0.590±0.00 0.126±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00021B CIL_00021B_0002 CGP 5:32124704-32313009

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118048 Gm11518-001 processed_pseudogene Mus_musculus 0 431
ENSMUST00000107249 Rpl27-002 protein_coding Mus_musculus 0 431
ENSMUST00000077856 Rpl27-001 protein_coding Mus_musculus 0 431
ENSMUST00000097682 Rpl27-ps3-201 protein_coding Mus_musculus 0 431
ENSMUST00000119683 Gm6341-001 processed_pseudogene Mus_musculus 0 414
ENSMUST00000088784 Rpl27-ps1-201 processed_pseudogene Mus_musculus 0 403
ENSMUST00000117470 Gm15779-001 processed_pseudogene Mus_musculus 0 372
ENSMUST00000120378 Rpl27-ps2-001 processed_pseudogene Mus_musculus 0 370
ENSMUST00000121828 Gm15730-001 processed_pseudogene Mus_musculus 0 363
ENSMUST00000079690 Gm4825-001 processed_pseudogene Mus_musculus 0 339
ENSMUST00000139939 Rpl27-003 processed_transcript Mus_musculus 0 313
ENSMUST00000120819 Gm12516-001 processed_pseudogene Mus_musculus 0 281
ENSMUST00000119016 Gm11699-001 processed_pseudogene Mus_musculus 0 189

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