C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L9 pseudogene 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000475906 RPL9P3-001 ENSG00000240392 9606 + 14:35262462-35263036 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000475906
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000475906 0.207±0.00 0.255±0.00 0.281±0.00 0.319±0.01 0.306±0.00 0.038±0.00 0.084±0.00 0.019±0.00 0.249±0.00 0.131±0.00 0.206±0.00 0.085±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00028P CIL_00028P_0001 CGP 14:35085467-35277614
CIL_00045I CIL_00045I_0001 CGP 14:35122549-35317493
CIL_0008MF CIL_0008MF_0001 VISTA 14:35250818-35851792

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119147 Rpl9-ps3-001 processed_pseudogene Mus_musculus 0 617
ENSMUST00000120821 Rpl9-ps2-001 processed_pseudogene Mus_musculus 0 555
ENSMUST00000120661 Gm9159-001 processed_pseudogene Mus_musculus 0 503
ENSMUST00000117749 Gm11462-001 processed_pseudogene Mus_musculus 0 453
ENSMUST00000120283 Gm14927-001 processed_pseudogene Mus_musculus 0 435
ENSMUST00000173020 Gm5227-001 processed_pseudogene Mus_musculus 0 425
ENSMUST00000129885 Gm14562-001 processed_pseudogene Mus_musculus 0 390
ENSMUST00000121372 Gm14732-001 processed_pseudogene Mus_musculus 0 305
ENSMUST00000120765 Gm17014-001 processed_pseudogene Mus_musculus 0 231

Loading