C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L34 pseudogene 31
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000475295 RPL34P31-001 ENSG00000239223 9606 + 17:27274107-27274477 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000475295
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000475295 0.192±0.00 0.390±0.00 0.041±0.00 0.117±0.00 0.073±0.00 0.073±0.00 0.193±0.00 0.035±0.00 0.035±0.00 0.139±0.00 0.089±0.00 0.071±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SM CIL_0007SM_0001 VISTA 17:27271510-27874835

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000084445 Gm10154-001 processed_pseudogene Mus_musculus 0 340
ENSMUST00000177415 Gm4705-001 processed_pseudogene Mus_musculus 0 340
ENSMUST00000121998 Rpl34-ps1-001 processed_pseudogene Mus_musculus 0 340
ENSMUST00000136334 Gm10086-001 processed_pseudogene Mus_musculus 0 335
ENSMUST00000081679 Gm6404-201 processed_pseudogene Mus_musculus 0 335
ENSMUST00000117957 Gm7857-001 processed_pseudogene Mus_musculus 0 300
ENSMUST00000104927 Gm2178-201 protein_coding Mus_musculus 0 248
ENSMUST00000122371 Gm13786-001 processed_pseudogene Mus_musculus 4e-38 161

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