C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein kinase C, gamma
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000474397 PRKCG-005 ENSG00000126583 9606 + 19:53881784-53891827 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryTestisENST00000474397
Transcript ID Ovary Testis
ENST00000474397 0.113±0.00 3.901±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004M7 CIL_0004M7_0001 CGP 19:53866223-53907652
CIL_0005P4 CIL_0005P4_0001 CGP 19:53879190-53943941

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000181221 PRKCG-201 protein_coding Mus_musculus 0 826
ENSMUST00000181455 PRKCG-202 protein_coding Mus_musculus 0 826
ENSMUST00000100301 Prkcg-201 protein_coding Mus_musculus 0 826
ENSMUST00000172109 Prkcg-202 protein_coding Mus_musculus 0 826
ENSMUST00000064921 Prkcb-003 protein_coding Mus_musculus 0 233
ENSMUST00000064989 Prkcb-001 protein_coding Mus_musculus 0 233
ENSMUST00000143692 Prkcb-002 nonsense_mediated_decay Mus_musculus 0 233
ENSMUST00000059595 Prkca-001 protein_coding Mus_musculus 0 213
ENSDART00000137211 prkcba-002 protein_coding Danio_rerio 9.00054e-42 174
ENSDART00000006211 prkcba-001 protein_coding Danio_rerio 9.00054e-42 174
ENSDART00000142610 prkcg-001 protein_coding Danio_rerio 5e-39 165
ENSMUST00000134725 Prkca-002 processed_transcript Mus_musculus 7e-33 145
ENSMUST00000133383 Apoh-002 protein_coding Mus_musculus 0.0000009 58

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