C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000474329 CTD-2086L14.1-001 ENSG00000242411 9606 - 19:56217168-56217777 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000474329
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000474329 0.705±0.00 0.700±0.00 0.204±0.00 0.457±0.00 0.735±0.00 0.079±0.00 0.187±0.00 0.394±0.00 1.082±0.00 0.856±0.00 0.276±0.00 0.314±0.21

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000120234 Gm12918-001 processed_pseudogene Mus_musculus 0 446
ENSMUST00000000756 Rpl13-001 protein_coding Mus_musculus 0 446
ENSMUST00000121821 Gm15710-001 processed_pseudogene Mus_musculus 0 440
ENSMUST00000079761 Gm10071-201 processed_pseudogene Mus_musculus 0 435
ENSMUST00000132275 Rpl13-004 retained_intron Mus_musculus 0 348
ENSMUST00000079960 Rpl13-ps3-201 protein_coding Mus_musculus 0 340
ENSMUST00000104990 Gm7290-001 processed_pseudogene Mus_musculus 0 333
ENSMUST00000121199 Gm12466-001 processed_pseudogene Mus_musculus 0 189
ENSMUST00000117813 Rpl13-ps5-001 processed_pseudogene Mus_musculus 1.4013e-45 187
ENSMUST00000119124 Gm15131-001 processed_pseudogene Mus_musculus 4.2039e-45 185
ENSMUST00000119734 Gm12011-001 processed_pseudogene Mus_musculus 5.04467e-44 182
ENSMUST00000129311 Rpl13-002 retained_intron Mus_musculus 1e-39 167

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