C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 2, regulatory subunit A, alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000462990 PPP2R1A-003 ENSG00000105568 9606 + 19:52201093-52226417 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000462990
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000462990 8.235±0.00 3.627±0.00 15.189±0.00 5.996±0.00 6.459±0.00 6.683±0.00 3.260±0.00 4.984±0.00 4.715±0.00 14.021±0.00 28.095±30.34 8.631±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000007708 Ppp2r1a-001 protein_coding Mus_musculus 0 2490
ENSDART00000016860 ppp2r1b-001 protein_coding Danio_rerio 0 1042
ENSMUST00000173658 Ppp2r1a-007 nonsense_mediated_decay Mus_musculus 0 704
ENSMUST00000173359 Ppp2r1a-006 retained_intron Mus_musculus 0 625
ENSMUST00000147983 Ppp2r1a-002 protein_coding Mus_musculus 0 305
ENSMUST00000136975 Ppp2r1a-003 retained_intron Mus_musculus 0 268

Loading