C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TSC22 domain family, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000458659 TSC22D1-001 ENSG00000102804 9606 - 13:44433519-44576565 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000458659
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000458659 3.867±0.00 6.155±0.00 33.715±0.00 5.420±0.01 9.288±2.69 7.194±5.79 8.710±7.15 5.689±0.00 40.302±0.00 8.731±1.91 10.753±3.83 31.289±15.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006MH CIL_0006MH_0002 CGP 13:44373665-44577147

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0008284 IEA positive regulation of cell proliferation
GO:0043065 IEA positive regulation of apoptotic process
GO:0043066 IEA negative regulation of apoptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048371 Tsc22d1-002 protein_coding Mus_musculus 0 4588
ENSMUST00000110888 Tsc22d1-006 protein_coding Mus_musculus 0 2832
ENSMUST00000177207 Tsc22d1-005 protein_coding Mus_musculus 0 987
ENSMUST00000022587 Tsc22d1-001 protein_coding Mus_musculus 0 985
ENSMUST00000133224 Tsc22d1-008 protein_coding Mus_musculus 0 656
ENSMUST00000101618 Tsc22d1-003 protein_coding Mus_musculus 0 656
ENSMUST00000142683 Tsc22d1-004 protein_coding Mus_musculus 0 656
ENSMUST00000140251 Tsc22d1-016 protein_coding Mus_musculus 0 632
ENSMUST00000175984 Tsc22d1-012 nonsense_mediated_decay Mus_musculus 0 536
ENSMUST00000176581 Tsc22d1-011 protein_coding Mus_musculus 0 531
ENSMUST00000177333 Tsc22d1-009 processed_transcript Mus_musculus 0 451
ENSMUST00000177471 Tsc22d1-013 nonsense_mediated_decay Mus_musculus 0 287

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