| Transcript ID | Testis |
|---|---|
| ENST00000449384 | 0.366±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | ribosomal protein L39 pseudogene 25 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000449384  |
RPL39P25-001 |
ENSG00000227271 |
9606 | - |
10:75269392-75269545  |
processed_pseudogene |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007JX | CIL_0007JX_0001 | UCNEbase | 10:74418410-76978156 |
| CIL_0008UO | CIL_0008UO_0001 | VISTA | 10:74941035-75542526 |
| CIL_000925 | CIL_000925_0001 | VISTA | 10:74961440-75563087 |
| CIL_00084B | CIL_00084B_0001 | VISTA | 10:75078488-75679926 |
| CIL_0008K8 | CIL_0008K8_0001 | VISTA | 10:75104806-75705881 |
| CIL_0007IE | CIL_0007IE_0001 | CGP | 10:75233969-75401906 |
| CIL_0008KK | CIL_0008KK_0001 | VISTA | 10:75241252-75843906 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000121292
|
Rpl39l-002 | protein_coding | Mus_musculus | 0 | 187 |
|
ENSMUST00000044103
|
Rpl39l-001 | protein_coding | Mus_musculus | 0 | 187 |
|
ENSMUST00000115231
|
Rpl39-001 | protein_coding | Mus_musculus | 3e-40 | 167 |
|
ENSMUST00000191066
|
RP23-127L14.1-001 | processed_pseudogene | Mus_musculus | 1e-39 | 165 |
|
ENSMUST00000142604
|
Rpl39-ps-002 | processed_transcript | Mus_musculus | 1e-38 | 161 |
|
ENSMUST00000121971
|
Gm12013-001 | processed_pseudogene | Mus_musculus | 1e-38 | 161 |
|
ENSMUST00000146505
|
Rpl39-ps-001 | transcribed_processed_pseudogene | Mus_musculus | 5e-38 | 159 |
|
ENSMUST00000117602
|
Gm15148-001 | processed_pseudogene | Mus_musculus | 5e-38 | 159 |
|
ENSMUST00000118985
|
Gm14541-001 | processed_pseudogene | Mus_musculus | 4e-34 | 147 |
|
ENSMUST00000121969
|
Gm11334-001 | processed_pseudogene | Mus_musculus | 1e-33 | 145 |
|
ENSMUST00000119534
|
Gm15067-001 | processed_pseudogene | Mus_musculus | 6e-32 | 139 |
|
ENSMUST00000138799
|
Rpl39-002 | retained_intron | Mus_musculus | 3e-30 | 134 |
|
ENSMUST00000118637
|
Gm11694-001 | processed_pseudogene | Mus_musculus | 1e-29 | 132 |
